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提取FA代码
- 皮层———————————————————————————–
- mri_vol2surf –mov mri/dtifit.nii.gz_FA.nii.gz –ref mri/orig.mgz –reg mri/3dfa-temp.mgz.reg –fwhm 0 –surf-fwhm 0 –hemi lh –projdist -1 –o mri/3dfa/subwhite-1.nii.gz
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- mri_vol2vol –s c37 –mov mri/nu.mgz –targ mri/nu.mgz –regheader –o mri/nu-temp.mgz –save-reg #cretate identity registration file
- mkdir -p mri/rGWC #create directory for surfaces
- mri_vol2surf –mov mri/nu.mgz –ref mri/nu.mgz –reg mri/nu-temp.mgz.reg –fwhm 0 –surf-fwhm 0 –hemi rh –projdist -1 –o mri/rGWC/subcortwm-1.nii.gz #make white matter intensity surface example below
- gzip -d mri/3dfa/subwhite-1.nii.gz
- cp mri/GWC/lh.gwc.nii mri/GWC/lh.gwc
- cp mri/GWC/lh.gwc surf
- cd ../
- mris_preproc –fsgd test2.fsgd –tar
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